Biochemistry & Molecular Biophysics (BMB) Undergraduate Courses (2018-19)
Ch/BMB 129. Introduction to Biophotonics. 9 units (3-0-6): first term. This course will cover basic optics and introduce modern optical spectroscopy principles and microscopy techniques. Topics include molecular spectroscopy; linear and nonlinear florescence microscopy; Raman spectroscopy; coherent microscopy; single-molecule spectroscopy; and super-resolution imaging. Instructor: Wei.
BMB/Bi/Ch 170. Biochemistry and Biophysics of Macromolecules and Molecular Assemblies. 9 units (3-0-6): first term. Detailed analysis of the structures of the four classes of biological molecules and the forces that shape them. Introduction to molecular biological and visualization techniques. Not offered 2018-19.
BMB/Bi/Ch 173. Biophysical/Structural Methods. 9 units (3-0-6): second term. Basic principles of modern biophysical and structural methods used to interrogate macromolecules from the atomic to cellular levels, including light and electron microscopy, X-ray crystallography, NMR spectroscopy, single molecule techniques, circular dichroism, surface plasmon resonance, mass spectrometry, and molecular dynamics and systems biological simulations. Instructor: Jensen.
BMB/Bi/Ch 174. Molecular Machines in the Cell. 9 units (3-0-6); third term: Prerequisites: Bi/Ch 110 and BMB/Bi/Ch 173. Discussion of macromolecular machines and pathways that illustrate the principles and biophysical methods taught in BMB/Bi/Ch 170, 173, and 178. Development of skills in literature analysis, information synthesis, and proposal writing. Instructors: Clemons, Shan, and various guest lecturers (subject to change each year).
BMB/Ch 178. Macromolecular Function: Kinetics, Energetics, and Mechanisms. 9 units (3-0-6): first term. Discussion of the energetic principles and molecular mechanisms that underlie enzyme's catalytic proficiency and exquisite specificity. Principles of allosteric regulation, selectivity, enzyme evolution, and computational enzyme design. Practical kinetics sections discuss how to infer molecular mechanisms from rate/equilibrium measurements and their application to complex biological systems, including steady-state and pre-steady-state kinetics, kinetic simulations, and kinetics at the single molecule resolution. Instructor: Shan.